BU06:Team D

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== Current Progress ==
== Current Progress ==
 +
===Silent Point Mutation: XbaI at bp 2411 of P. luminescens LuxCDABE===
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                _/_____      <---XbaI cut
 +
            5' AAT CTA GAT 3'
 +
                N  L  D
 +
              Asn Leu Asp
 +
 +
          Triplets for these A.A.'s
 +
                N    L  D
 +
              AAT  TTA GAT
 +
              AAC  TTG GAC
 +
                    CTG
 +
                    CTT
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                    CTC
 +
                    CTA
 +
 +
          Codon Usage Bias! (Frequency: per thousand)
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          Leu Codon    E.coliK12      P.lumin
 +
              CUU          11.0          12.1
 +
              CUC          11.0          9.1
 +
              CUA            3.9          9.0
 +
              CUG          52.8          29.6
 +
CUA in P.lum is 9.0/1000, for a silent point mutation of Leucine, CUU or CUC with frequency of 11.0/1000...
 +
and its still Leu!!!!

Revision as of 19:04, 26 June 2006

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Current Progress

Silent Point Mutation: XbaI at bp 2411 of P. luminescens LuxCDABE

                _/_____       <---XbaI cut
           5' AAT CTA GAT 3'
               N   L   D
              Asn Leu Asp
          Triplets for these A.A.'s
               N    L   D
              AAT  TTA GAT
              AAC  TTG GAC
                   CTG
                   CTT
                   CTC
                   CTA
          Codon Usage Bias! (Frequency: per thousand) 
          Leu Codon     E.coliK12      P.lumin
             CUU           11.0          12.1
             CUC           11.0           9.1
             CUA            3.9           9.0
             CUG           52.8          29.6

CUA in P.lum is 9.0/1000, for a silent point mutation of Leucine, CUU or CUC with frequency of 11.0/1000... and its still Leu!!!!


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