Davidson 2006
From 2006.igem.org
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• [http://jb.asm.org/cgi/content/full/185/3/1097 Plasmid DNA Supercoiling and Gyrase Activity in Escherichia coli Wild-Type and rpoS Stationary-Phase Cells] | • [http://jb.asm.org/cgi/content/full/185/3/1097 Plasmid DNA Supercoiling and Gyrase Activity in Escherichia coli Wild-Type and rpoS Stationary-Phase Cells] | ||
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| + | [[Enhancer_Sequence_Paper.pdf| PERKINS-BALDING D, DIAS D, and GLASGOW A:Location, Degree, and Direction of DNA Bending Associated | ||
| + | with the Hin Recombinational Enhancer Sequence and | ||
| + | Fis-Enhancer Complex ]] | ||
==<font face="chalkboard"><font color='orange'>Parts Created</font color></font face>== | ==<font face="chalkboard"><font color='orange'>Parts Created</font color></font face>== | ||
Revision as of 16:12, 12 July 2006
- Malcolm, Laurie, Sabriya, Erin, Lance
Attention Davidson Colleagues -- Here are the one-pancake assembly plans. Check them and let us know if there are mistakes. Western Team
Assembly Plan
Students
• Sabriya Rosemond is a rising junior biology major at Hampton University.
• Erin Zwack is a rising junior biology major at Davidson College.
• Lance Harden is a rising sophomore at Davidson College who will probably major in math.
Faculty
• A. Malcolm Campbell Department of Biology
• Laurie J. Heyer Department of Mathematics
Papers of Interest
• The Effects of Ethidium Bromide and Mg++ Ion on Strand Exchange in the Hin-mediated Inversion Reaction. Hee Jung Lee et al. Excellent description of Hin recombination mechanism.
• 'The Effects of Symmetrical Recombination Site hixC on Hin Recombinase Function. Heon Man Lim et al.
• The role of the loxP spacer region in P1 site-specific recombination. Ronald H.Hoess et al.
• Non-contact positions impose site selectivity on Cre recombinase. Andreas W. Rufer and Brian Sauer
• 'Growth Phase-Dependent Variation in Protein Composition of the Escherichia coli Nucleoid
• Hin-mediated Inversion on Positively Supercoiled DNA
Parts Created
Questions
Assembly Issues
Current Course of Action
Plasmids and Bacteria Hix and RE Hin and Antibiotic Pancakes Things That we Have Done
Pancake Simulators aka The Lancelator
MATLAB Code
User-Friendly Version
Power-User Version
Power-User Update
Findmin
Bigtrial
Pancakeplotter
Signedperms
