ETH Sim Mod Xor
From 2006.igem.org
(Difference between revisions)
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back to → [[ETH Zurich 2006|ETH 2006 Main Page]] → [[ETH 2006 Half adder#Modeling|Half adder idea]] | back to → [[ETH Zurich 2006|ETH 2006 Main Page]] → [[ETH 2006 Half adder#Modeling|Half adder idea]] | ||
| - | + | ==== help constants ==== | |
| + | [[ETH_Sim_Constants|constants legend]] | ||
| + | ==== constant set: '2h prot. half life' ==== | ||
[[image:ETH_Sim_Mod_XOR_2h.jpg]] | [[image:ETH_Sim_Mod_XOR_2h.jpg]] | ||
| - | simulated with these constants | + | simulated with these constants ([[ETH_Sim_Constants|constants legend]]) |
<pre> | <pre> | ||
case '2h prot. half life' | case '2h prot. half life' | ||
| Line 38: | Line 40: | ||
---- | ---- | ||
| + | ==== constant set: '5h prot. half life' ==== | ||
[[image:ETH_Sim_Mod_XOR_5h.jpg]] | [[image:ETH_Sim_Mod_XOR_5h.jpg]] | ||
| - | simulated with these constants | + | simulated with these constants ([[ETH_Sim_Constants|constants legend]]) |
<pre> | <pre> | ||
otherwise %case '5h prot. half life' | otherwise %case '5h prot. half life' | ||
Latest revision as of 06:37, 20 September 2006
back to → ETH 2006 Main Page → Half adder idea
help constants
constant set: '2h prot. half life'
simulated with these constants (constants legend)
case '2h prot. half life'
% approximate (median) concentration of I1/I2/I1p/I2p
% used for k/K constants depending on this concentration
stateIxx = 100;
k.I1 = 1; % []
k.I2 = 1; % []
k.I1p = .3; % []
k.I2p = .3; % []
k.I1I1p = 1/stateIxx; % [1/(min*muM)] dep. on I1/I1p
k.I2I2p = 1/stateIxx; % [1/(min*muM)] dep. on I2/I2p
k.I1I1p_ = 0.02; % [1/min]
k.I2I2p_ = 0.02; % [1/min]
k.I1inact = 0.01; % [1/min]
k.I2inact = 0.01; % [1/min]
d.I1 = log(2)/120; % [1/min]
d.I2 = log(2)/120;
d.I1p = log(2)/120;
d.I2p = log(2)/120;
d.I1inact = log(2)/120;
d.I2inact = log(2)/120;
d.mOut = log(2)/30;
d.Out = log(2)/120;
r.Out = 0.1; % []
p.Out = 0.1 * r.Out; % a * r % []
l.Out = 1; % [1/min]
K.Out = stateIxx; % [muM] dep. on I1/I2
n.Out = 1; %int, ~1-4 % []
constant set: '5h prot. half life'
simulated with these constants (constants legend)
otherwise %case '5h prot. half life'
% approximate (median) concentration of I1/I2/I1p/I2p
% used for k/K constants depending on this concentration
stateIxx = 100;
k.I1 = 1; % []
k.I2 = 1; % []
k.I1p = .3; % []
k.I2p = .3; % []
k.I1I1p = 1/stateIxx; % [1/(min*muM)] dep. on I1/I1p
k.I2I2p = 1/stateIxx; % [1/(min*muM)] dep. on I2/I2p
k.I1I1p_ = 0.02; % [1/min]
k.I2I2p_ = 0.02; % [1/min]
k.I1inact = 0.01; % [1/min]
k.I2inact = 0.01; % [1/min]
d.I1 = log(2)/300; % [1/min]
d.I2 = log(2)/300;
d.I1p = log(2)/300;
d.I2p = log(2)/300;
d.I1inact = log(2)/300;
d.I2inact = log(2)/300;
d.mOut = log(2)/30;
d.Out = log(2)/300;
r.Out = 0.1; % []
p.Out = 0.1 * r.Out; % a * r % []
l.Out = 1; % [1/min]
K.Out = stateIxx; % [muM] dep. on I1/I2
n.Out = 1; %int, ~1-4 % []
