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iGEM 2005 - The summer 2005 intercollegiate Genetically Engineered Machine competition.

Participating Schools

Berkeley [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Berkeley Parts]	Caltech [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Caltech Parts] [http://www.cds.caltech.edu/~murray/synbio/wiki/index.php WIKI]
Cambridge [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Cambridge Parts]	Davidson [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Davidson Parts]
ETH Zurich [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_ETHZ Parts]	Harvard [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Harvard Parts] [http://karma.med.harvard.edu/wiki/iGEM_2005 WIKI]
[http://model.mit.edu/igem/index.php?title=People MIT] [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_MIT Parts] [http://model.mit.edu/igem WIKI]	Oklahoma [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Oklamhoma Parts]
Penn State [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Penn_State Parts]	Princeton [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Princeton Parts] [http://ehukai.ee.princeton.edu/wi/index.php WIKI]
Toronto [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Toronto Parts]	UCSF [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_UCSF Parts]
UT Austin [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_UTAustin Parts]	[http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Registry Registry Parts]

Events

[http://parts2.mit.edu/r/parts/htdocs/iGEM2005/ttt.cgi Teacher's Workshop] - May 15-15, 2005
- Parts, Devices, Systems & Engineering Theory
- Risks and Rewards
- Notes on Tom Knight's talk
- [http://web.mit.edu/endy/www/scraps/talks/iGEM/Silver.yeast.ppt Pam Silver's yeast powerpoint]
Jamboree, November 5-6, 2005 (to change the name of the Jamboree, please send Drew Endy a check for $30,000,000)

Papers for Students to Read

General Review Papers

A. Malcolm Campbell. 2005. Meeting Report: Synthetic Biology Jamboree for Undergraduates. Cell Biology Education. 4: 19 - 23. (Meeting Report for 2004 Jamboree) [http://www.cellbioed.org/pdf/04-11-0047.pdf URL]
Dan Ferber. 2004. Microbes Made to Order. Science. Vol. 303: 158 - 161. (Good general overview), [http://www.sciencemag.org/cgi/content/full/303/5655/158 URL]

Jeff Hasty, David McMillen, and J. J. Collins. 2002. Engineered Gene Circuits. Nature. Vol. 420: 224 - 230. (Scholarly Review Paper), [http://www.nature.com/nature/journal/v420/n6912/abs/nature01257_fs.html URL]

Philip Ball. 2004. Starting from Scratch. Nature. Vol. 431: 624 - 626. (OK general overview), [http://www.nature.com/news/2004/041004/pf/431624a_pf.html URL]

Editors of Nature. 2004. Futures of Artificial Life. Nature. Vol. 431: 613. (Editorial that addresses ethical considerations), [http://www.bio.davidson.edu/courses/synthetic/papers/Synthetic_Editorial.pdf URL]

Research Papers in Synthetic Biology

Timothy S. Gardner, Charles R. Cantor, and James J. Collins. 2000. Construction of a genetic toggle switch in Escherichia coli. Nature. Vol. 403. 339 - 342. (Bistable gene regulatory network, toggled by transient chemical or thermal induction, to serve as cellular memory)

Robert T. Batey, Sunny D. Gilbert, and Rebecca K. Montange. 2004. Structure of a Natural Guanine-responsive Riboswitch Complexed with a Metabolite Hypoxanthine. Nature. Vol. 432. 411 - 415. (Distinguishes Riboswitches from Aptamers and Antiswitches; also shows 3D structure of aptamer and ligand)

News Summary of Batey et al. 2004. (Batey et al., paper above)

Laising Yen et al. 2004. Exogenous Controlof Mammalian Gene Expression through Modulation of RNA Self-cleavage. Nature. Vol. 431: 471 - 476. (mRNA-mediated regulation of translation)

Yina Kuang, Israel Biran, and David R. Walt. 2004. Simultaneously Monitoring Gene Expression Kinetics and Genetic Noise in Single Cells by Optical Well Arrays. Analytical Chemistry. Vol. 76: 6282 - 6286. (Analysis of two promoters)

Thomas Bulter, Sun-Gu Lee, Wilson WaiChun Wong, Eileen Fung, Michael R. Conner, and James C. Liao. 2004. Design of artificial cell-cell communication using gene and metabolic networks. PNAS. 101(8): 2299-2304. (Quorum sensor using acetate signal)

Hideki Kobayashi, Mads Kaern, Michihiro Araki, Kristy Chung, Timothy S. Gardner, Charles R. Cantor, and James J. Collins. Programmable cells: Interfacing natural and engineered gene networks. PNAS. 101(22): 8414-8419. (Toggle switch interfaced with 1) SOS signaling pathway for DNA damage response and 2) quorum sensing signalling pathway)

Sara Hooshangi, Stephan Thiberge, and Ron Weiss. 2005. Ultrasensitivity and noise propagation in a synthetic transcriptional cascade. PNAS. 102(10): 3581–3586. (Basic Research Paper)

Bayer, Travis S. and Christina D . Smolke. 2005. Programmable ligand-controlled riboregulators of eukaryotic gene expression. Nature Biotechnology. 23 (3): 337 - 343. (Antiswithces that turn off or on mRNA translation, regulated by amptamer binding ligands)

Isaacs, Farren J. and James J. Collins. 2005. Plug-and-play with RNA. Nature Biotechnology. 23 (3): 306 -307. (Commentary on Bayer & Smolke, 2005.)

Subhayu Basu, Yoram Gerchman, Cynthia H. Collins, Frances H. Arnold and Ron Weiss. 2005. A synthetic multicellular system for programmed pattern formation. Nature. Vol. 434:1130-1134 (Cool patterns, seeded with senders, with receivers responding to chemical gradients) [http://www.nature.com/nature/journal/v434/n7037/abs/nature03461.html URL]

Mathematical Modeling in Synthetic Biology

Hasty J, McMillen D, Isaacs F, Collins JJ. 2001. Computational studies of gene regulatory networks: in numero molecular biology. Nat Rev Genet. 2001 Apr;2(4):268-79.
Guet, C&abreve;lin C., Elowitz, Michael B., Hsing, Weihong, Leibler, Stanislas Combinatorial Synthesis of Genetic Networks Science 2002 296: 1466-1470

McAdams HH, Arkin A. Simulation of prokaryotic genetic circuits. Annu Rev Biophys Biomol Struct. 1998; 27:199-224. [http://dx.doi.org/10.1146/annurev.biophys.27.1.199 Link]

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Possible Fun Groups

Resources

Please see [http://meta.wikipedia.org/wiki/MediaWiki_i18n documentation on customizing the interface] and the [http://meta.wikipedia.org/wiki/MediaWiki_User%27s_Guide User's Guide] for usage and configuration help. [http://www.town-china.cn 中央吸尘][http://www.town-china.cn 新风系统] [http://www.town-china.cn 杭州通诚投资公司][http://www.021boy.com 成人用品] [http://www.91yg.com 成人用品][http://www.air520.com 杭州婚庆][http://www.anteyi.cn 屏蔽器] [http://www.atetech.com.cn 手机信号屏蔽器][http://www.51wisdom.com 网站建设] [http://www.51wisdom.com 杭州网络公司] [http://www.56918.com/web.htm 网站建设][http://www.56918.com 虚拟主机][http://www.56918.com 域名注册] [http://www.56918.com/promote.htm 网站推广][http://www.56918.com/email.htm 企业邮箱][http://www.56918.com/domain.htm 域名申请] [http://www.56156.com 物流][http://www.dzsc.com 电子][http://www.ic37.com IC] [http://www.51wisdom.com/jianshe_1.htm 网站建设] [http://www.51wisdom.com/jz.htm 虚拟主机] [http://www.51wisdom.com/yinyong_1.asp 域名注册] [http://www.51wisdom.com/tuiguang.asp 网站推广] [http://www.51wisdom.com/youju.asp 企业邮局][http://www.zhkaw.com 癌症] [http://www.51wisdom.com.cn/vi.htm vi设计] [http://www.51wisdom.com.cn/wangye 网页设计] [http://www.air520.com 杭州婚庆] [http://www.air520.com 杭州婚庆司仪][http://www.air520.com 杭州婚庆主持] [http://www.ywxjm.com 腰带] [http://www.51wisdom.com.cn/pingmian.htm 平面设计] [http://www.51wisdom.net/biaozhi.htm 标志设计] [http://www.anteyi.cn 手机信号屏蔽器] [http://www.anteyi.cn 屏蔽器]

Funding

iGEM is an initiative of the MIT [http://icampus.mit.edu/ iCampus] program, which is funded by Microsoft Corp. iCampus sponsors faculty innovations in educational technology, helps incubate them through classroom use, and promotes their adoption, evaluation and continued evolution through worldwide multi-institutional cooperation. [http://www.town-china.cn 中央吸尘][http://www.town-china.cn 新风系统] [http://www.town-china.cn 杭州通诚投资公司][http://www.021boy.com 成人用品] [http://www.91yg.com 成人用品][http://www.air520.com 杭州婚庆][http://www.anteyi.cn 屏蔽器] [http://www.atetech.com.cn 手机信号屏蔽器][http://www.51wisdom.com 网站建设] [http://www.51wisdom.com 杭州网络公司] [http://www.56918.com/web.htm 网站建设][http://www.56918.com 虚拟主机][http://www.56918.com 域名注册] [http://www.56918.com/promote.htm 网站推广][http://www.56918.com/email.htm 企业邮箱][http://www.56918.com/domain.htm 域名申请] [http://www.56156.com 物流][http://www.dzsc.com 电子][http://www.ic37.com IC] [http://www.51wisdom.com/jianshe_1.htm 网站建设] [http://www.51wisdom.com/jz.htm 虚拟主机] [http://www.51wisdom.com/yinyong_1.asp 域名注册] [http://www.51wisdom.com/tuiguang.asp 网站推广] [http://www.51wisdom.com/youju.asp 企业邮局][http://www.zhkaw.com 癌症] [http://www.51wisdom.com.cn/vi.htm vi设计] [http://www.51wisdom.com.cn/wangye 网页设计] [http://www.air520.com 杭州婚庆] [http://www.air520.com 杭州婚庆司仪][http://www.air520.com 杭州婚庆主持] [http://www.ywxjm.com 腰带] [http://www.51wisdom.com.cn/pingmian.htm 平面设计] [http://www.51wisdom.net/biaozhi.htm 标志设计] [http://www.anteyi.cn 手机信号屏蔽器] [http://www.anteyi.cn 屏蔽器]

Main Page

From 2006.igem.org

Revision as of 06:53, 14 September 2005

Contents

Participating Schools

Events

Papers for Students to Read

General Review Papers

Research Papers in Synthetic Biology

Mathematical Modeling in Synthetic Biology

Possible Fun Groups

Resources

Funding

Views

Personal tools

Navigation

The Registry

Past/present/future years

Wiki related

Search

Toolbox

@@ Line 97: / Line 97: @@
 #[[iGEM 2006 Planning]]
 #[[Others (Publicity?)]]
-[http://www.town-china.cn 中央吸尘][http://www.town-china.cn 新风系统]
-[http://www.town-china.cn 杭州通诚投资公司][http://www.021boy.com 成人用品]
-[http://www.91yg.com 成人用品][http://www.air520.com 杭州婚庆][http://www.anteyi.cn 屏蔽器]
-[http://www.atetech.com.cn 手机信号屏蔽器][http://www.51wisdom.com 网站建设] [http://www.51wisdom.com 杭州网络公司]
-[http://www.56918.com/web.htm 网站建设][http://www.56918.com 虚拟主机][http://www.56918.com 域名注册]
-[http://www.56918.com/promote.htm 网站推广][http://www.56918.com/email.htm 企业邮箱][http://www.56918.com/domain.htm 域名申请]
-[http://www.56156.com 物流][http://www.dzsc.com 电子][http://www.ic37.com IC]
-[http://www.51wisdom.com/jianshe_1.htm 网站建设] [http://www.51wisdom.com/jz.htm 虚拟主机]
-[http://www.51wisdom.com/yinyong_1.asp 域名注册] [http://www.51wisdom.com/tuiguang.asp 网站推广]
-[http://www.51wisdom.com/youju.asp 企业邮局][http://www.zhkaw.com 癌症] [http://www.51wisdom.com.cn/vi.htm vi设计] [http://www.51wisdom.com.cn/wangye 网页设计] [http://www.air520.com 杭州婚庆]
-[http://www.air520.com 杭州婚庆司仪][http://www.air520.com 杭州婚庆主持]
-[http://www.ywxjm.com 腰带] [http://www.51wisdom.com.cn/pingmian.htm 平面设计]
-[http://www.51wisdom.net/biaozhi.htm 标志设计] [http://www.anteyi.cn 手机信号屏蔽器] [http://www.anteyi.cn 屏蔽器]
 ==Resources==