ETH 2006 Half adder

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[[ETH Zurich 2006|back to ETH 2006]]
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back to [[ETH Zurich 2006|ETH 2006 Main Page]] or to [[ETH 2006 Ideas|other project ideas]]
= Half-adder or Full-adder =
= Half-adder or Full-adder =
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== Idea: Pattern recognition ==
== Idea: Pattern recognition ==
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''Main Goal:''
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===Main Goal:===
*Write something with a chemical on a petri plate (like '''ETH''' for example)
*Write something with a chemical on a petri plate (like '''ETH''' for example)
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**Bacteria gets red when pattern on the plate and picture do not match
**Bacteria gets red when pattern on the plate and picture do not match
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''Implementation from the ingenieur point of view''
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'''→ Illustration of the concepts: ''' [[media:Half-adder.pdf|sliles]] (pdf, 352KB), [[media:Half-adder-handout.pdf|handout]] (pdf, 268KB)
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====Implementation from the ingenieur point of view====
*Half Adder
*Half Adder
* = opportunity to build an AND and an XOR Gate
* = opportunity to build an AND and an XOR Gate
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''Implementation from the biologist point of view''
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====Implementation from the biologist point of view====
*AND Gate: presence of chemical induces the production of an inactive protein, which is activated by a second protein (produced when light is present): the first protein is then activating GFP production
*AND Gate: presence of chemical induces the production of an inactive protein, which is activated by a second protein (produced when light is present): the first protein is then activating GFP production
*XOR Gate: I think Marko had a good idea about that (I didn't really got it)
*XOR Gate: I think Marko had a good idea about that (I didn't really got it)
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*we would need to give a kind of first signal to the system (to don't have light reactions before a certain moment, otherwise we have to work in a dark room...), an activation signal after the bacterias have grown on the plate
*we would need to give a kind of first signal to the system (to don't have light reactions before a certain moment, otherwise we have to work in a dark room...), an activation signal after the bacterias have grown on the plate
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'''Illustration of the above concepts: ''' [[media:Half-adder.pdf|sliles]] (pdf, 352KB), [[media:Half-adder-handout.pdf|handout]] (pdf, 268KB)
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==== Pro's & Con's====
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''Pro's:''
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* meaningful from engineering point
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* valuable parts for synthetic biology
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* experiments visually attractive
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back to [[ETH Zurich 2006|ETH 2006 Main Page]] or to [[ETH 2006 Ideas|other project ideas]]
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* probably simple enough
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''Con's:''
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* cheap copy of “bio-film” project (iGEM 2004)
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* sensational experiments, have little in common with HA
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* too simple?

Revision as of 11:28, 31 July 2006

back to ETH 2006 Main Page or to other project ideas

Contents

Half-adder or Full-adder

An implementation of a half-adder or full-adder: 1-bit adder with carry

  • [http://en.wikipedia.org/wiki/Full_adder half/full adder in wikipedia]

Idea: Pattern recognition

Main Goal:

  • Write something with a chemical on a petri plate (like ETH for example)
  • Let Bacteria grow uniformly on the plate
  • Expose the plate to a picture (black and white) of the same pattern
  • Result:
    • Bacteria gets green when pattern on the plate and picture match (light and chemical)
    • Bacteria does not express fluorescent protein when pattern on the plate and picture match (no light and no chemical)
    • Bacteria gets red when pattern on the plate and picture do not match

→ Illustration of the concepts: sliles (pdf, 352KB), handout (pdf, 268KB)

Implementation from the ingenieur point of view

  • Half Adder
  • = opportunity to build an AND and an XOR Gate

Implementation from the biologist point of view

  • AND Gate: presence of chemical induces the production of an inactive protein, which is activated by a second protein (produced when light is present): the first protein is then activating GFP production
  • XOR Gate: I think Marko had a good idea about that (I didn't really got it)
  • a light sensible promoter (there are some)
  • a chemical sensible promoter (chemical to be defined)
  • we would need to give a kind of first signal to the system (to don't have light reactions before a certain moment, otherwise we have to work in a dark room...), an activation signal after the bacterias have grown on the plate

Pro's & Con's

Pro's:

  • meaningful from engineering point
  • valuable parts for synthetic biology
  • experiments visually attractive
  • probably simple enough

Con's:

  • cheap copy of “bio-film” project (iGEM 2004)
  • sensational experiments, have little in common with HA
  • too simple?
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