Useful Reading

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Adebowale Adeniji, National Network of Environmental Management Studies Fellow, Office of Solid Waste and Emergency Response, U.S. Environmental Protection Agency, 2004.  
Adebowale Adeniji, National Network of Environmental Management Studies Fellow, Office of Solid Waste and Emergency Response, U.S. Environmental Protection Agency, 2004.  
[http://www.clu-in.org/download/studentpapers/bio_of_metals_paper.pdf Link]
[http://www.clu-in.org/download/studentpapers/bio_of_metals_paper.pdf Link]
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*''Habit of bacterially induced precipitates of calcium carbonate and the influence of medium viscosity on mineralogy.''
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Buczynski C, Chafetz, H S, ''Journal of Sedimentary Petrology.'' March 1991, Vol 61, No 2, 226-233
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[http://jsedres.sepmonline.org/cgi/reprint/61/2/226 Link]
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'''Papers on modeling of gene regulation process'''
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*''strcuture and function of the feed-forward loop network motif''
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Mangan S, Alon U, ''Proc Natl Acad Sci U S A.'' 2003, 100:11980-11985
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[http://www.pnas.org/cgi/content/full/100/21/11980 Link]
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*''Design of gene circuits: lessons from bacteria''
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Wall ME, Hlavacek WS, Savageau MA ''Nature review genetics'' 2004, 5:34
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[http://www.nature.com/nrg/journal/v5/n1/full/nrg1244_fs.html Link]
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*''Design principles for regulator gene expression in a repressible gene circuit''
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Wall ME, Hlavacek WS, Savageau MA ''J mol Biol'' 2003, 332:861-876
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*''A synthetic oscillatory network of transcriptional regulators''
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Elowitz MB, Leibler S, ''Nature'' 2000, 403:335
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'''Edinburgh powerpoint template'''
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[[Image:Content template.ppt]]
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'''Introductory Presentations'''
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[http://2006.igem.org/Image:Biology_workshop1.ppt Microbiology]
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[http://2006.igem.org/Image:Biology_workshop2.ppt Molecular Biology]
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[http://2006.igem.org/Image:Modelling_introduction.pdf Introduction to Modelling]
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[http://2006.igem.org/University_of_Edinburgh_2006 Main page]
[http://2006.igem.org/University_of_Edinburgh_2006 Main page]

Latest revision as of 14:31, 20 July 2006

  • Spatiotemporal control of gene expression with pulse-generating networks.

Basu S, Mehreja R, Thiberge S, Chen MT, Weiss R. Proc Natl Acad Sci U S A. 2004 Apr 27;101(17):6355-60. [http://www.pubmedcentral.gov/articlerender.fcgi?tool=pubmed&pubmedid=15096621 Link]

  • Production of the antimalarial drug precursor artemisinic acid in engineered yeast.

Dae-Kyun Ro et al. Nature. 2006 Apr 13; 440(7086): 940-943.[http://www.nature.com/nature/journal/v440/n7086/full/nature04640.html Link]

  • Synthetic biology: new engineering rules for an emerging discipline.

Andrianantoandro E, Basu S, Karig DK, Weiss R. Mol Syst Biol. Epub 2006 May 16.[http://www.nature.com/msb/journal/v2/n1/full/msb4100073.html Link]

  • Taking pictures with E. coli: signal processing using synthetic biology.

Levy M, Tabor JJ, Wong STC. IEEE Signal Processing Magazine 2006 May; 23(3): 140-142 [http://ieeexplore.ieee.org/iel5/79/34166/01628897.pdf? Link]

  • Teaching bacteria a new language.

Gerchman Y, Weiss R. Proc Natl Acad Sci U S A. 2004 Feb 24; 101(8):2221-2. [http://www.pnas.org/cgi/content/full/101/8/2221 Link]

  • Bacterial biosynthesis of a calcium phosphate bone-substitute material.

Thackray A C, Sammons R L, Macaskie L E, Yong P, Lugg H, Marquis P. Journal of Materials Science: Materials in Medicine. April 2004, 15 403 - 406 [http://www.springerlink.com/(a5z5xk45yoycugbyly1u2hei)/app/home/contribution.asp?referrer=parent&backto=issue,19,44;journal,28,166;linkingpublicationresults,1:100192,1 Link]

  • Some like it hot: spicing up ion channels.

Clapham D E. Nature 389 October 1997, 783-784 [http://www.nature.com/nature/journal/v389/n6653/full/389783a0_fs.html Link]

  • Bioremediation of Arsenic, Chromium, Lead and Mercury .

Adebowale Adeniji, National Network of Environmental Management Studies Fellow, Office of Solid Waste and Emergency Response, U.S. Environmental Protection Agency, 2004. [http://www.clu-in.org/download/studentpapers/bio_of_metals_paper.pdf Link]

  • Habit of bacterially induced precipitates of calcium carbonate and the influence of medium viscosity on mineralogy.

Buczynski C, Chafetz, H S, Journal of Sedimentary Petrology. March 1991, Vol 61, No 2, 226-233 [http://jsedres.sepmonline.org/cgi/reprint/61/2/226 Link]


Papers on modeling of gene regulation process

  • strcuture and function of the feed-forward loop network motif

Mangan S, Alon U, Proc Natl Acad Sci U S A. 2003, 100:11980-11985 [http://www.pnas.org/cgi/content/full/100/21/11980 Link]

  • Design of gene circuits: lessons from bacteria

Wall ME, Hlavacek WS, Savageau MA Nature review genetics 2004, 5:34 [http://www.nature.com/nrg/journal/v5/n1/full/nrg1244_fs.html Link]

  • Design principles for regulator gene expression in a repressible gene circuit

Wall ME, Hlavacek WS, Savageau MA J mol Biol 2003, 332:861-876

  • A synthetic oscillatory network of transcriptional regulators

Elowitz MB, Leibler S, Nature 2000, 403:335


Edinburgh powerpoint template

File:Content template.ppt


Introductory Presentations

[http://2006.igem.org/Image:Biology_workshop1.ppt Microbiology]

[http://2006.igem.org/Image:Biology_workshop2.ppt Molecular Biology]

[http://2006.igem.org/Image:Modelling_introduction.pdf Introduction to Modelling]


[http://2006.igem.org/University_of_Edinburgh_2006 Main page]

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