ETH 2006 Half adder

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[[ETH Zurich 2006|back to ETH 2006]]
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back to → [[ETH Zurich 2006|ETH 2006 Main Page]] → [[ETH 2006 Meat Monitor|Meat Monitor idea]] → [[ETH 2006 Ideas|other project ideas]]
= Half-adder or Full-adder =
= Half-adder or Full-adder =
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== Idea: Pattern recognition ==
== Idea: Pattern recognition ==
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''Main Goal:''
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''→ Illustration of the concepts: ''  
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* [[media:Half-adder.pdf|slides]] (pdf, 352KB)
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* [[media:Half-adder-handout.pdf|handout]] (pdf, 268KB)
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*Write something with a chemical on a petri plate (like '''ETH''' for example)
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====Main Goal:====
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*Let Bacteria grow uniformly on the plate
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*Expose the plate to a picture (black and white) of the same pattern
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*Result:
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**Bacteria gets green when pattern on the plate and picture match (light and chemical)
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**Bacteria does not express fluorescent protein when pattern on the plate and picture match (no light and no chemical)
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**Bacteria gets red when pattern on the plate and picture do not match
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''Implementation from the ingenieur point of view''
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# Write something with a chemical on a petri plate (like '''ETH''' for example)
 +
# Let Bacteria grow uniformly on the plate
 +
# Expose the plate to a picture (black and white) of the same pattern
 +
# Result:
 +
#*Bacteria gets green when pattern on the plate and picture match (light and chemical)
 +
#*Bacteria does not express fluorescent protein when pattern on the plate and picture match (no light and no chemical)
 +
#*Bacteria gets red when pattern on the plate and picture do not match
 +
 
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====Implementation from the ingenieur point of view====
*Half Adder
*Half Adder
* = opportunity to build an AND and an XOR Gate
* = opportunity to build an AND and an XOR Gate
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''Implementation from the biologist point of view''
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====Implementation from the biologist point of view====
*AND Gate: presence of chemical induces the production of an inactive protein, which is activated by a second protein (produced when light is present): the first protein is then activating GFP production
*AND Gate: presence of chemical induces the production of an inactive protein, which is activated by a second protein (produced when light is present): the first protein is then activating GFP production
*XOR Gate: I think Marko had a good idea about that (I didn't really got it)
*XOR Gate: I think Marko had a good idea about that (I didn't really got it)
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*a light sensible promoter (there are some)
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*a light sensible promoter (there are some, see [http://partsregistry.org/Featured_Parts:Light_Sensor here])
*a chemical sensible promoter (chemical to be defined)
*a chemical sensible promoter (chemical to be defined)
*we would need to give a kind of first signal to the system (to don't have light reactions before a certain moment, otherwise we have to work in a dark room...), an activation signal after the bacterias have grown on the plate
*we would need to give a kind of first signal to the system (to don't have light reactions before a certain moment, otherwise we have to work in a dark room...), an activation signal after the bacterias have grown on the plate
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'''Illustration of the above concepts: ''' [[media:Half-adder.pdf|sliles]] (pdf, 352KB), [[media:Half-adder-handout.pdf|handout]] (pdf, 268KB)
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==== Pro's & Con's====
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''Pro's:''
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* meaningful from engineering point
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----
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* valuable parts for synthetic biology
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* stepwise proceeding applicable (→ intermediate and partial results!)
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* experiments visually attractive
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* probably simple enough
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back to [[ETH Zurich 2006|ETH 2006 Main Page]] or to [[ETH 2006 Ideas|other project ideas]]
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''Con's:''
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* cheap copy of “bio-film” project ([http://partsregistry.org/cgi/htdocs/SBC04/index.cgi iGEM 2004])
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* sensational experiments, have little in common with half adder
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* maybe that a ''big vision'' is lacking
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* general/practical benefit? (counter-argument: is this required?)
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* too simple?

Latest revision as of 14:42, 26 October 2006

back to → ETH 2006 Main PageMeat Monitor ideaother project ideas

Contents

Half-adder or Full-adder

An implementation of a half-adder or full-adder: 1-bit adder with carry

  • [http://en.wikipedia.org/wiki/Full_adder half/full adder in wikipedia]

Idea: Pattern recognition

→ Illustration of the concepts:

Main Goal:

  1. Write something with a chemical on a petri plate (like ETH for example)
  2. Let Bacteria grow uniformly on the plate
  3. Expose the plate to a picture (black and white) of the same pattern
  4. Result:
    • Bacteria gets green when pattern on the plate and picture match (light and chemical)
    • Bacteria does not express fluorescent protein when pattern on the plate and picture match (no light and no chemical)
    • Bacteria gets red when pattern on the plate and picture do not match

Implementation from the ingenieur point of view

  • Half Adder
  • = opportunity to build an AND and an XOR Gate

Implementation from the biologist point of view

  • AND Gate: presence of chemical induces the production of an inactive protein, which is activated by a second protein (produced when light is present): the first protein is then activating GFP production
  • XOR Gate: I think Marko had a good idea about that (I didn't really got it)
  • a light sensible promoter (there are some, see [http://partsregistry.org/Featured_Parts:Light_Sensor here])
  • a chemical sensible promoter (chemical to be defined)
  • we would need to give a kind of first signal to the system (to don't have light reactions before a certain moment, otherwise we have to work in a dark room...), an activation signal after the bacterias have grown on the plate

Pro's & Con's

Pro's:

  • meaningful from engineering point
  • valuable parts for synthetic biology
  • stepwise proceeding applicable (→ intermediate and partial results!)
  • experiments visually attractive
  • probably simple enough

Con's:

  • cheap copy of “bio-film” project ([http://partsregistry.org/cgi/htdocs/SBC04/index.cgi iGEM 2004])
  • sensational experiments, have little in common with half adder
  • maybe that a big vision is lacking
  • general/practical benefit? (counter-argument: is this required?)
  • too simple?
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