Table of preliminary model constants
From 2006.igem.org
(Difference between revisions)
(→Inhibitor Protein Parameters) |
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| Line 87: | Line 87: | ||
|c4L | |c4L | ||
|.33 | |.33 | ||
| - | |Equilibrium constant for LacI binding | + | |Equilibrium constant for LacI tetramer binding to Lac operator |
| + | |- | ||
| + | |c1T | ||
| + | |.05 | ||
| + | |Equilibrium constant for TetR dimerization | ||
| + | |- | ||
| + | |c2T | ||
| + | |.33 | ||
| + | |Equilibrium constant for TetR dimer binding to first operator | ||
| + | |- | ||
| + | |c3T | ||
| + | |.33 | ||
| + | |Equilibrium constant for TetR dimer binding to second operator | ||
| + | |- | ||
| + | |c1A | ||
| + | |.05 | ||
| + | |Equilibrium constant for AraC monomer binding to first operator | ||
| + | |- | ||
| + | |c2A | ||
| + | |.33 | ||
| + | |Equilibrium constant for AraC monomer binding to second operator | ||
|- | |- | ||
|} | |} | ||
Revision as of 06:36, 1 November 2006
General Parameters
| Parameter | Value | Meaning |
|---|---|---|
| m | 20 Copies | Plasmid Copy Number |
Inhibitor Protein Parameters
| Parameter | Value | Meaning |
|---|---|---|
| alphaT1 | .01 | Relative transcription level for repressed (1 TetR dimer bound) pTetR promoter |
| alphaT2 | .01 | Relative transcription level for doubly repressed (2 TetR dimers bound) pTetR promoter |
| alphaL | .01 | Relative transcription level for repressed (1 LacI tetramer bound) pLacI promoter |
| alphaA | .01 | Relative transcription level for repressed (two AraC monomers bound) pBAD promoter |
| betaA | 1000 | maximum number of proteins produced from the pBAD promoter per cell division |
| betaL | 1000 | maximum number of proteins produced from the pLacI promoter per cell division |
| betaT | 1000 | maximum number of proteins produced from the pTetR promoter per cell division |
| etaLT | 1 | Relative rate of TetR translation from pLacI promoter |
| etaLA | 1 | Relative rate of AraC translation from pLacI promoter |
| etaAL | 1 | Relative rate of LacI translation from pBAD promoter |
| etaAT | 1 | Relative rate of TetR translation from pBAD promoter |
| etaTL | 1 | Relative rate of LacI translation from pTetR promoter |
| etaTA | 1 | Relative rate of AraC translation from pTetR promoter |
| c1L | .05 | Equilibrium constant for LacI dimerization |
| c2L | .05 | Equilibrium constant for LacI trimerization |
| c3L | .05 | Equilibrium constant for LacI tetramerization |
| c4L | .33 | Equilibrium constant for LacI tetramer binding to Lac operator |
| c1T | .05 | Equilibrium constant for TetR dimerization |
| c2T | .33 | Equilibrium constant for TetR dimer binding to first operator |
| c3T | .33 | Equilibrium constant for TetR dimer binding to second operator |
| c1A | .05 | Equilibrium constant for AraC monomer binding to first operator |
| c2A | .33 | Equilibrium constant for AraC monomer binding to second operator |
