Table of preliminary model constants
From 2006.igem.org
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====Inhibitor Protein Parameters==== | ====Inhibitor Protein Parameters==== | ||
Revision as of 06:40, 1 November 2006
General Parameters
| Parameter | Value | Meaning |
|---|---|---|
| m | 20 Copies | Plasmid Copy Number |
| v | 1um^3 | cell volume |
Inhibitor Protein Parameters
| Parameter | Value | Meaning |
|---|---|---|
| alphaT1 | .01 | Relative transcription level for repressed (1 TetR dimer bound) pTetR promoter |
| alphaT2 | .01 | Relative transcription level for doubly repressed (2 TetR dimers bound) pTetR promoter |
| alphaL | .01 | Relative transcription level for repressed (1 LacI tetramer bound) pLacI promoter |
| alphaA | .01 | Relative transcription level for repressed (two AraC monomers bound) pBAD promoter |
| betaA | 1000 | maximum number of proteins produced from the pBAD promoter per cell division |
| betaL | 1000 | maximum number of proteins produced from the pLacI promoter per cell division |
| betaT | 1000 | maximum number of proteins produced from the pTetR promoter per cell division |
| etaLT | 1 | Relative rate of TetR translation from pLacI promoter |
| etaLA | 1 | Relative rate of AraC translation from pLacI promoter |
| etaAL | 1 | Relative rate of LacI translation from pBAD promoter |
| etaAT | 1 | Relative rate of TetR translation from pBAD promoter |
| etaTL | 1 | Relative rate of LacI translation from pTetR promoter |
| etaTA | 1 | Relative rate of AraC translation from pTetR promoter |
| c1L | .05 | Equilibrium constant for LacI dimerization |
| c2L | .05 | Equilibrium constant for LacI trimerization |
| c3L | .05 | Equilibrium constant for LacI tetramerization |
| c4L | .33 | Equilibrium constant for LacI tetramer binding to Lac operator |
| c1T | .05 | Equilibrium constant for TetR dimerization |
| c2T | .33 | Equilibrium constant for TetR dimer binding to first operator |
| c3T | .33 | Equilibrium constant for TetR dimer binding to second operator |
| c1A | .05 | Equilibrium constant for AraC monomer binding to first operator |
| c2A | .33 | Equilibrium constant for AraC monomer binding to second operator |
