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<BIG><B>iGEM 2005</B></BIG>
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__NOTOC__
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The summer 2005 intercollegiate Genetically Engineered Machine competition.
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==Participating Schools==
 
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''Click to see each team's parts''
 
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*[http://rosalind.csail.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Berkeley Berkeley]
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<font size=4>Note: The [http://igem.org iGEM 2008 Wiki] can be found here!</font>
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*[http://rosalind.csail.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Caltech Caltech]
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*[http://rosalind.csail.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Cambridge Cambridge]
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===Davidson College Synth-Aces===
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<font size=1>This wiki is archived and the contents frozen. Please update your links.</font>
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====[http://rosalind.csail.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Davidson Davdison Parts in Registry]====
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[http://www.bio.davidson.edu/courses/synthetic/students.html '''Summer 2005 Research Students''']
 
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*'''Links to Courses'''
 
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**[http://www.bio.davidson.edu/courses/synthetic/synthetic.html Synthetic Lab Course Fall 2005]
 
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**[http://www.bio.davidson.edu/genomics Genomics Lecture Course (with Systems Biology and Synthetic Biology Sections)]
 
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**[http://www.bio.davidson.edu/programs/Genomics/concentration.html Genomics Concentration (interdiciplinary minor)]
 
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*[http://rosalind.csail.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_ETHZ ETH_Zurich]
 
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*[http://rosalind.csail.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Harvard Harvard]
 
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If you would like help setting up a '''[http://karma.med.harvard.edu/wiki/iGEM_2005 WIKI]''', please, contact [http://karma.med.harvard.edu/wiki/User_talk:Alexanderwait me]!
 
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*[http://rosalind.csail.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_MIT MIT]
 
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**[http://model.mit.edu/igem/ MIT team's WIKI]
 
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*[http://rosalind.csail.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Oklamhoma Oklahoma]
 
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*[http://rosalind.csail.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Penn_State Penn State]
 
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*[http://rosalind.csail.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Princeton Princeton]
 
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*[http://rosalind.csail.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Toronto Toronto]
 
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*[http://rosalind.csail.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_UCSF UCSF]
 
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*[http://rosalind.csail.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_UTAustin UT Austin]
 
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*[http://rosalind.csail.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Registry Registry]
 
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==Events==
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<table width=100% height=5px><tr><td bgcolor="#2171B8" align="center"><font color=#ffffff size=1></font></td></tr></table>
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*[http://rosalind.csail.mit.edu/r/parts/htdocs/iGEM2005/ttt.cgi Teacher's Workshop] - May 15-15, 2005
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**[[Parts, Devices, Systems & Engineering Theory]]
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**[[Risks and Rewards]]
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**[[Notes on Tom Knight's talk]]
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**[http://web.mit.edu/endy/www/scraps/talks/iGEM/Silver.yeast.ppt Pam Silver's yeast powerpoint]
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*Jamboree, November 5-6, 2005 (to change the name of the Jamboree, please send Drew Endy a check for $30,000,000)
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==Papers for Students to Read==
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<font size=4>'''iGEM 2006''' - The international Genetically Engineered Machine competition</font>
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===General Review Papers===
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<br>
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''iGEM is an international arena where student teams compete to design and assemble engineered machines using advanced genetic components and technologies.''
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<font size=1>[http://2006.igem.org/About_iGEM Learn more.]</font>
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<table width=100% height=5px><tr><td bgcolor="#2171B8" align="center"><font color=#ffffff size=1></font></td></tr></table>
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*A. Malcolm Campbell. 2005. Meeting Report: Synthetic Biology Jamboree for Undergraduates. Cell Biology Education. 4: 19 - 23. (Meeting Report for 2004 Jamboree) [http://www.cellbioed.org/pdf/04-11-0047.pdf URL]
 
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*Dan Ferber. 2004. Microbes Made to Order. Science. Vol. 303: 158 - 161. (Good general overview), [http://www.sciencemag.org/cgi/content/full/303/5655/158 URL]
 
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*Jeff Hasty, David McMillen, and J. J. Collins. 2002. Engineered Gene Circuits. Nature. Vol. 420: 224 - 230. (Scholarly Review Paper), [http://www.nature.com/nature/journal/v420/n6912/abs/nature01257_fs.html URL]
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{|cellspacing="1" style="text-align:left"
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*Philip Ball. 2004. Starting from Scratch. Nature. Vol. 431: 624 - 626. (OK general overview), [http://www.nature.com/news/2004/041004/pf/431624a_pf.html URL]
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| {{Click || image=buttonschool.gif | link=Schools_Participating_in_iGEM_2006 | width=30px | height=30px }}
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|<font size="2" color="black">'''Meet the [[Schools_Participating_in_iGEM_2006|37 teams]] participating in 2006'''</font>
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|[[image:Verticalrule.png]]
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*Editors of Nature. 2004. Futures of Artificial Life. Nature. Vol. 431: 613. (Editorial that addresses ethical considerations), [http://www.bio.davidson.edu/courses/synthetic/papers/Synthetic_Editorial.pdf URL]
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| {{Click || image=buttonprepare.gif | link=Resources | width=30px | height=30px }}
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|<font size="1" color="black">See [[Resources |teaching resources]] to learn about our unique methods</font>
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|[[image:Verticalrule.png]]
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===Research Papers in Synthetic Biology===
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| {{Click || image=registry.png | link=Main_Page | width=45px | height=45px }}
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|<font size="1" color="green">'''Ready to build?''' </font><font size="1" color="black">Go to the [http://partsregistry.org Registry] for BioBrick parts and tools</font>
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|[[image:Verticalrule.png]]
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*Timothy S. Gardner, Charles R. Cantor, and James J. Collins.  2000.  Construction of a genetic toggle switch in Escherichia coli.  Nature. Vol. 403.  339 - 342. (Bistable gene regulatory network, toggled by transient chemical or thermal induction, to serve as cellular memory)
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| {{Click || image=buttonambassador.gif | link=IGEM_Ambassador_Program | width=40px | height=40px }}
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| <font size="1" color="black">The [[IGEM_Ambassador_Program|Ambassador Program]] helps teams around the globe succeed</font>
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|[[image:Verticalrule.png]]
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*Robert T. Batey, Sunny D. Gilbert, and Rebecca K. Montange. 2004. Structure of a Natural Guanine-responsive Riboswitch Complexed with a Metabolite Hypoxanthine. Nature. Vol. 432. 411 - 415. (Distinguishes Riboswitches from Aptamers and Antiswitches; also shows 3D structure of aptamer and ligand)
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| {{Click || image=dontpanic.jpg | link=help! | width=30px | height=30px }}
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|<font size="1" color="black">Give and get [[help!|help information and FAQs]] here.</font>
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*News Summary of Batey et al. 2004. (Batey et al., paper above)
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</div>
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*Laising Yen et al. 2004. Exogenous Controlof Mammalian Gene Expression through Modulation of RNA Self-cleavage. Nature. Vol. 431: 471 - 476. (mRNA-mediated regulation of translation)
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[http://2006.igem.org/wiki/index.php/Jamboree https://static.igem.org/mediawiki/2006/8/8f/JamboreeSmall.png]
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| valign="top" style="padding: 0px; border: 2px solid #2171B8;"|
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[http://igem2006.com https://static.igem.org/mediawiki/2006/f/f4/IGEMAboveCommunitysmall.png]
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*Yina Kuang, Israel Biran, and David R. Walt. 2004. Simultaneously Monitoring Gene Expression Kinetics and Genetic Noise in Single Cells by Optical Well Arrays. Analytical Chemistry. Vol. 76: 6282 - 6286. (Analysis of two promoters)
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[[image:Radio-iGEM-current-events.gif|Current Events]]
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*Thomas Bulter, Sun-Gu Lee, Wilson WaiChun Wong, Eileen Fung, Michael R. Conner, and James C. Liao. 2004. Design of artificial cell-cell communication using gene and metabolic networks.  PNAS. 101(8): 2299-2304. (Quorum sensor using acetate signal)
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<font size="1" color="red">>></font> Registration for iGEM 2007 is now open at [http://www.igem2007.com www.igem2007.com]
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*Visit the iGEM 2006 web site detailing results from the 2006 Jamboree and public relations information @ [http://www.igem2006.com www.igem2006.com].
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*Don't forget to mark your Favorite Parts in the Registry.  [http://partsregistry.org/Help:Favorite_Parts Here's how]
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*Check out the Jamboree 2006 [[Jamboree:Images|Image Gallery]]
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*See the latest Jamboree information [[Jamboree|here]].
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*Hideki Kobayashi, Mads Kaern, Michihiro Araki, Kristy Chung, Timothy S. Gardner, Charles R. Cantor, and James J. Collins.  Programmable cells: Interfacing natural and engineered gene networks. PNAS. 101(22): 8414-8419. (Toggle switch interfaced with 1) SOS signaling pathway for DNA damage response and 2) quorum sensing signalling pathway)
 
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*Sara Hooshangi, Stephan Thiberge, and Ron Weiss. 2005. Ultrasensitivity and noise propagation in a synthetic transcriptional cascade. PNAS. 102(10): 3581–3586. (Basic Research Paper)
 
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*Bayer, Travis S. and Christina D. Smolke. 2005. Programmable ligand-controlled riboregulators of eukaryotic gene expression. Nature Biotechnology. 23 (3): 337 - 343. (Antiswithces that turn off or on mRNA translation, regulated by amptamer binding ligands)
 
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*Isaacs, Farren J. and James J. Collins. 2005. Plug-and-play with RNA. Nature Biotechnology. 23 (3): 306 -307. (Commentary on Bayer & Smolke, 2005.)
 
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* Subhayu Basu, Yoram Gerchman, Cynthia H. Collins, Frances H. Arnold and Ron Weiss. 2005. A synthetic multicellular system for programmed pattern formation. Nature. Vol. 434:1130-1134 (Cool patterns, seeded with senders, with receivers responding to chemical gradients)
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<font color=mediumblue>'''Check for [[Current Events|Past Events]]...'''
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==Possible Fun Groups==
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| width="480px" valign="top" style="padding: 0px; border: 2px solid #2171B8;"|
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#[[Awards Panel]]
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[[image:Radio-iGEM-News.gif |iGEM News]]
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#[[Jamboree Planning]]
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#[[Editorial Board]]
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#[[Standards of Practice]]
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#[[iGEM 2006 Planning]]
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#[[Others (Publicity?)]]
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==Resources==
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<font size="1" color="red">>> </font> [http://www.discover.com/issues/dec-06/cover/ Jay Keasling - Scientist of the Year] <small>Discover Magazine</small>
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#[[Blue Heron Point of Contact]]
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*[http://www.sciencedaily.com/releases/2006/11/061114193826.htm Gene Machine: Cells Engineered To Prevent Sepsis Win Synthetic Biology Competition] <small>Science Daily</small>
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#[[Part Nicknames]]
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*[http://science.slashdot.org/article.pl?sid=06/11/06/1913228&threshold=-1  Genetically Engineered Machines Competition] <small>Slashdot.org</small>
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#[[Lab Protocols]]
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*[http://www.technologyreview.com/read_article.aspx?id=17716&ch=biotech Bizarre bacterial creations] <small>Technology Review</small>
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*[http://www.boston.com/news/education/higher/articles/2006/11/05/genetic_jamboree_draws_innovators/ Genetic Jamboree draws innovators] <small>The Boston Globe</small>
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Please see [http://meta.wikipedia.org/wiki/MediaWiki_i18n documentation on customizing the interface]
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and the [http://meta.wikipedia.org/wiki/MediaWiki_User%27s_Guide User's Guide] for usage and configuration help.
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<font color=mediumblue>'''add your own [[iGEM News|iGEM News]]...'''
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|}
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<font size=1>iGEM is an initiative of the MIT [http://icampus.mit.edu/ iCampus] program, which is funded by Microsoft Corp. iCampus sponsors faculty innovations in educational technology, helps incubate them through classroom use, and promotes their adoption, evaluation and continued evolution through worldwide multi-institutional cooperation.</font>
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<hr>
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<font size=1; color="LightSlateGray">iGEM Competition c/o 32 Vassar Street, Room 314, Cambridge, MA 02139 (617) 258 5244 | [[join_igem|Join iGEM]] | Support iGEM </font>

Latest revision as of 14:17, 3 May 2008


Note: The iGEM 2008 Wiki can be found here!

This wiki is archived and the contents frozen. Please update your links.



iGEM 2006 - The international Genetically Engineered Machine competition
iGEM is an international arena where student teams compete to design and assemble engineered machines using advanced genetic components and technologies. Learn more.


https://static.igem.org/mediawiki/2006/8/8f/JamboreeSmall.png

https://static.igem.org/mediawiki/2006/f/f4/IGEMAboveCommunitysmall.png

Current Events

>> Registration for iGEM 2007 is now open at www.igem2007.com

  • Visit the iGEM 2006 web site detailing results from the 2006 Jamboree and public relations information @ www.igem2006.com.
  • Don't forget to mark your Favorite Parts in the Registry. Here's how
  • Check out the Jamboree 2006 Image Gallery
  • See the latest Jamboree information here.



Check for Past Events...

iGEM News

>> Jay Keasling - Scientist of the Year Discover Magazine





add your own iGEM News...

iGEM is an initiative of the MIT iCampus program, which is funded by Microsoft Corp. iCampus sponsors faculty innovations in educational technology, helps incubate them through classroom use, and promotes their adoption, evaluation and continued evolution through worldwide multi-institutional cooperation.

iGEM Competition c/o 32 Vassar Street, Room 314, Cambridge, MA 02139 (617) 258 5244 | Join iGEM | Support iGEM

Retrieved from "http://2006.igem.org/wiki/index.php/Main_Page"
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