Main Page

From 2006.igem.org

(Difference between revisions)
Jump to: navigation, search
 
(318 intermediate revisions not shown)
Line 1: Line 1:
__NOTOC__
__NOTOC__
-
'''<big>iGEM 2005</big> - The summer 2005 intercollegiate Genetically Engineered Machine competition.'''
 
-
== iGEM 2005 [[Jamboree]], November 5 & 6 ==
+
<font size=4>Note:  The [http://igem.org iGEM 2008 Wiki] can be found here!</font>
-
During the first weekend of November, students and instructors from all of the schools in this year's competition will meet
+
-
at MIT to present their projects and celebrate their accomplishments. Please join us and learn how
+
-
Synthetic Biology is changing the teaching and engineering of biology.
+
-
== Special Events on Synthetic Biology: [[IBE Annual Meeting]], March 10-12, Tucson, Arizona ==
+
<font size=1>This wiki is archived and the contents frozen. Please update your links.</font>
-
==Participating Schools==
 
-
{| width=400 align=center
 
-
|[[Berkeley]] [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Berkeley Parts]
 
-
|[[Caltech]] [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Caltech Parts] [http://www.cds.caltech.edu/~murray/synbio/wiki/index.php WIKI] 
 
-
|- 
 
-
       
+
<table width=100% height=5px><tr><td bgcolor="#2171B8" align="center"><font color=#ffffff size=1></font></td></tr></table>
-
|[[Cambridge]] [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Cambridge Parts] [http://www.ccbi.cam.ac.uk/iGEM2005/index.php/Main_Page WIKI]
+
-
|[[Davidson]] [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Davidson Parts]
+
-
|-
+
-
|[[ETH Zurich]] [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_ETHZ Parts]
+
-
|[[Harvard]] [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Harvard Parts] [http://karma.med.harvard.edu/wiki/iGEM_2005 WIKI]
+
-
|-
+
-
|[http://model.mit.edu/igem/index.php?title=People MIT] [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_MIT Parts] [http://model.mit.edu/igem WIKI]
+
-
|[[Oklahoma]] [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Oklamhoma Parts]
+
-
|-
+
-
|[[Penn State]] [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Penn_State Parts]
+
-
|[[Princeton]] [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Princeton Parts] [http://ehukai.ee.princeton.edu/wi/index.php WIKI]
+
-
|-
+
-
|[[Toronto]] [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Toronto Parts]
+
-
|[[UCSF]] [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_UCSF Parts]
+
-
|-
+
-
|[[UT Austin]] [http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_UTAustin Parts]
+
-
|[http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Registry Registry Parts]
+
-
|}
+
-
==Events==
+
<font size=4>'''iGEM 2006''' - The international Genetically Engineered Machine competition</font>
-
*[http://parts2.mit.edu/r/parts/htdocs/iGEM2005/ttt.cgi Teacher's Workshop] - May 15-15, 2005
+
<br>
-
**[[Parts, Devices, Systems & Engineering Theory]]
+
''iGEM is an international arena where student teams compete to design and assemble engineered machines using advanced genetic components and technologies.''
-
**[[Risks and Rewards]]
+
<font size=1>[http://2006.igem.org/About_iGEM Learn more.]</font>
-
**[[Notes on Tom Knight's talk]]
+
<table width=100% height=5px><tr><td bgcolor="#2171B8" align="center"><font color=#ffffff size=1></font></td></tr></table>
-
**[http://web.mit.edu/endy/www/scraps/talks/iGEM/Silver.yeast.ppt Pam Silver's yeast powerpoint]
+
-
*[[Jamboree]], November 5-6, 2005
+
-
==Papers for Students to Read==
 
-
===General Review Papers===
 
-
*A. Malcolm Campbell. 2005. Meeting Report: Synthetic Biology Jamboree for Undergraduates. Cell Biology Education. 4: 19 - 23. (Meeting Report for 2004 Jamboree) [http://www.cellbioed.org/pdf/04-11-0047.pdf URL]
+
<div id="menu">
-
*Dan Ferber. 2004. Microbes Made to Order. Science. Vol. 303: 158 - 161. (Good general overview), [http://www.sciencemag.org/cgi/content/full/303/5655/158 URL]
+
{|cellspacing="1" style="text-align:left"
-
*Jeff Hasty, David McMillen, and J. J. Collins. 2002. Engineered Gene Circuits. Nature. Vol. 420: 224 - 230. (Scholarly Review Paper), [http://www.nature.com/nature/journal/v420/n6912/abs/nature01257_fs.html URL]
+
| {{Click || image=buttonschool.gif | link=Schools_Participating_in_iGEM_2006 | width=30px | height=30px }}
 +
|<font size="2" color="black">'''Meet the [[Schools_Participating_in_iGEM_2006|37 teams]] participating in 2006'''</font>
 +
|[[image:Verticalrule.png]]
-
*Philip Ball. 2004. Starting from Scratch. Nature. Vol. 431: 624 - 626. (OK general overview), [http://www.nature.com/news/2004/041004/pf/431624a_pf.html URL]
+
| {{Click || image=buttonprepare.gif | link=Resources | width=30px | height=30px }}
 +
|<font size="1" color="black">See [[Resources |teaching resources]] to learn about our unique methods</font>
 +
|[[image:Verticalrule.png]]
-
*Editors of Nature. 2004. Futures of Artificial Life. Nature. Vol. 431: 613. (Editorial that addresses ethical considerations), [http://www.bio.davidson.edu/courses/synthetic/papers/Synthetic_Editorial.pdf URL]
+
| {{Click || image=registry.png | link=Main_Page | width=45px | height=45px }}
 +
|<font size="1" color="green">'''Ready to build?''' </font><font size="1" color="black">Go to the [http://partsregistry.org Registry] for BioBrick parts and tools</font>
 +
|[[image:Verticalrule.png]]
-
===Research Papers in Synthetic Biology===
+
| {{Click || image=buttonambassador.gif | link=IGEM_Ambassador_Program | width=40px | height=40px }}
 +
| <font size="1" color="black">The [[IGEM_Ambassador_Program|Ambassador Program]] helps teams around the globe succeed</font>
 +
|[[image:Verticalrule.png]]
-
*Timothy S. Gardner, Charles R. Cantor, and James J. Collins.  2000.  Construction of a genetic toggle switch in Escherichia coli.  Nature. Vol. 403.  339 - 342. (Bistable gene regulatory network, toggled by transient chemical or thermal induction, to serve as cellular memory)
+
| {{Click || image=dontpanic.jpg | link=help! | width=30px | height=30px }}
 +
|<font size="1" color="black">Give and get [[help!|help information and FAQs]] here.</font>
-
*Robert T. Batey, Sunny D. Gilbert, and Rebecca K. Montange. 2004. Structure of a Natural Guanine-responsive Riboswitch Complexed with a Metabolite Hypoxanthine. Nature. Vol. 432. 411 - 415. (Distinguishes Riboswitches from Aptamers and Antiswitches; also shows 3D structure of aptamer and ligand)
+
|-
 +
|}
 +
</div>
-
*News Summary of Batey et al. 2004. (Batey et al., paper above)
+
{| border="0" cellpadding="0" cellspacing="0" width="460px"; border: 2px solid #2171B8;"
 +
|
 +
| valign="top" style="padding: 0px; border: 2px solid #2171B8;"|
 +
[http://2006.igem.org/wiki/index.php/Jamboree https://static.igem.org/mediawiki/2006/8/8f/JamboreeSmall.png]
 +
| valign="top" style="padding: 0px; border: 2px solid #2171B8;"|
 +
[http://igem2006.com https://static.igem.org/mediawiki/2006/f/f4/IGEMAboveCommunitysmall.png]
 +
|}
-
*Laising Yen et al. 2004. Exogenous Controlof Mammalian Gene Expression through Modulation of RNA Self-cleavage. Nature. Vol. 431: 471 - 476. (mRNA-mediated regulation of translation)
+
{| border="0" cellpadding="0" cellspacing="0" width="480px"; background-color: #CCCCCC; border: 2px solid #2171B8;"
 +
|valign="top" style="padding:0px; border: 2px solid #2171B8;" width="470px"|
 +
[[image:Radio-iGEM-current-events.gif|Current Events]]
-
*Yina Kuang, Israel Biran, and David R. Walt. 2004. Simultaneously Monitoring Gene Expression Kinetics and Genetic Noise in Single Cells by Optical Well Arrays. Analytical Chemistry. Vol. 76: 6282 - 6286. (Analysis of two promoters)
+
<font size="1" color="red">>></font> Registration for iGEM 2007 is now open at [http://www.igem2007.com www.igem2007.com]
 +
*Visit the iGEM 2006 web site detailing results from the 2006 Jamboree and public relations information @ [http://www.igem2006.com www.igem2006.com].
 +
*Don't forget to mark your Favorite Parts in the Registry. [http://partsregistry.org/Help:Favorite_Parts Here's how]
 +
*Check out the Jamboree 2006 [[Jamboree:Images|Image Gallery]]
 +
*See the latest Jamboree information [[Jamboree|here]].
-
*Thomas Bulter, Sun-Gu Lee, Wilson WaiChun Wong, Eileen Fung, Michael R. Conner, and James C. Liao.  2004. Design of artificial cell-cell communication using gene and metabolic networks.  PNAS. 101(8): 2299-2304.  (Quorum sensor using acetate signal)
 
-
*Hideki Kobayashi, Mads Kaern, Michihiro Araki, Kristy Chung, Timothy S. Gardner, Charles R. Cantor, and James J. Collins.  Programmable cells: Interfacing natural and engineered gene networks. PNAS. 101(22): 8414-8419. (Toggle switch interfaced with 1) SOS signaling pathway for DNA damage response and 2) quorum sensing signalling pathway)
 
-
*Sara Hooshangi, Stephan Thiberge, and Ron Weiss. 2005. Ultrasensitivity and noise propagation in a synthetic transcriptional cascade. PNAS. 102(10): 3581–3586. (Basic Research Paper)
 
-
*Bayer, Travis S. and Christina D . Smolke. 2005. Programmable ligand-controlled riboregulators of eukaryotic gene expression. Nature Biotechnology. 23 (3): 337 - 343. (Antiswithces that turn off or on mRNA translation, regulated by amptamer binding ligands)
 
-
*Isaacs, Farren J. and James J. Collins. 2005. Plug-and-play with RNA. Nature Biotechnology. 23 (3): 306 -307. (Commentary on Bayer & Smolke, 2005.)
+
<font color=mediumblue>'''Check for [[Current Events|Past Events]]...'''
-
* Subhayu Basu, Yoram Gerchman, Cynthia H. Collins, Frances H. Arnold and Ron Weiss. 2005. A synthetic multicellular system for programmed pattern formation. Nature. Vol. 434:1130-1134 (Cool patterns, seeded with senders, with receivers responding to chemical gradients) [http://www.nature.com/nature/journal/v434/n7037/abs/nature03461.html URL]
+
| width="480px" valign="top" style="padding: 0px; border: 2px solid #2171B8;"|
 +
[[image:Radio-iGEM-News.gif |iGEM News]]
-
===Mathematical Modeling in Synthetic Biology===
+
<font size="1" color="red">>> </font> [http://www.discover.com/issues/dec-06/cover/ Jay Keasling - Scientist of the Year] <small>Discover Magazine</small>
-
* Hasty J, McMillen D, Isaacs F, Collins JJ. 2001. Computational studies of gene regulatory networks: in numero molecular biology. Nat Rev Genet. 2001 Apr;2(4):268-79.
+
*[http://www.sciencedaily.com/releases/2006/11/061114193826.htm Gene Machine: Cells Engineered To Prevent Sepsis Win Synthetic Biology Competition] <small>Science Daily</small>
-
* Guet, C&abreve;lin C., Elowitz, Michael B., Hsing, Weihong, Leibler, Stanislas Combinatorial Synthesis of Genetic Networks Science 2002 296: 1466-1470
+
*[http://science.slashdot.org/article.pl?sid=06/11/06/1913228&threshold=-1  Genetically Engineered Machines Competition] <small>Slashdot.org</small>
 +
*[http://www.technologyreview.com/read_article.aspx?id=17716&ch=biotech Bizarre bacterial creations] <small>Technology Review</small>
 +
*[http://www.boston.com/news/education/higher/articles/2006/11/05/genetic_jamboree_draws_innovators/ Genetic Jamboree draws innovators] <small>The Boston Globe</small>
-
* McAdams HH, Arkin A. Simulation of prokaryotic genetic circuits. Annu Rev Biophys Biomol Struct. 1998; 27:199-224. [http://dx.doi.org/10.1146/annurev.biophys.27.1.199 Link]
 
-
==Possible Fun Groups==
 
-
#[[Awards Panel]]
 
-
#[[Jamboree Planning]]
 
-
#[[Editorial Board]]
 
-
#[[Standards of Practice]]
 
-
#[[iGEM 2006 Planning]]
 
-
#[[Others (Publicity?)]]
 
-
==Resources==
 
-
#[[Blue Heron Point of Contact]]
 
-
#[[Part Nicknames]]
 
-
#[[Lab Protocols]]
 
-
Please see [http://meta.wikipedia.org/wiki/MediaWiki_i18n documentation on customizing the interface]
 
-
and the [http://meta.wikipedia.org/wiki/MediaWiki_User%27s_Guide User's Guide] for usage and configuration help.
 
-
==Funding==
 
-
iGEM is an initiative of the MIT [http://icampus.mit.edu/ iCampus] program, which is funded by Microsoft Corp. iCampus sponsors faculty innovations in educational technology, helps incubate them through classroom use, and promotes their adoption, evaluation and continued evolution through worldwide multi-institutional cooperation.
+
 
 +
 
 +
<font color=mediumblue>'''add your own [[iGEM News|iGEM News]]...'''
 +
|}
 +
 
 +
<font size=1>iGEM is an initiative of the MIT [http://icampus.mit.edu/ iCampus] program, which is funded by Microsoft Corp. iCampus sponsors faculty innovations in educational technology, helps incubate them through classroom use, and promotes their adoption, evaluation and continued evolution through worldwide multi-institutional cooperation.</font>
 +
 
 +
<hr>
 +
<font size=1; color="LightSlateGray">iGEM Competition c/o 32 Vassar Street, Room 314, Cambridge, MA 02139 (617) 258 5244 | [[join_igem|Join iGEM]] | Support iGEM </font>

Latest revision as of 14:17, 3 May 2008


Note: The iGEM 2008 Wiki can be found here!

This wiki is archived and the contents frozen. Please update your links.



iGEM 2006 - The international Genetically Engineered Machine competition
iGEM is an international arena where student teams compete to design and assemble engineered machines using advanced genetic components and technologies. Learn more.


https://static.igem.org/mediawiki/2006/8/8f/JamboreeSmall.png

https://static.igem.org/mediawiki/2006/f/f4/IGEMAboveCommunitysmall.png

Current Events

>> Registration for iGEM 2007 is now open at www.igem2007.com

  • Visit the iGEM 2006 web site detailing results from the 2006 Jamboree and public relations information @ www.igem2006.com.
  • Don't forget to mark your Favorite Parts in the Registry. Here's how
  • Check out the Jamboree 2006 Image Gallery
  • See the latest Jamboree information here.



Check for Past Events...

iGEM News

>> Jay Keasling - Scientist of the Year Discover Magazine





add your own iGEM News...

iGEM is an initiative of the MIT iCampus program, which is funded by Microsoft Corp. iCampus sponsors faculty innovations in educational technology, helps incubate them through classroom use, and promotes their adoption, evaluation and continued evolution through worldwide multi-institutional cooperation.

iGEM Competition c/o 32 Vassar Street, Room 314, Cambridge, MA 02139 (617) 258 5244 | Join iGEM | Support iGEM

Retrieved from "http://2006.igem.org/wiki/index.php/Main_Page"
Personal tools
Past/present/future years