Davidson 2006

From 2006.igem.org

(Difference between revisions)
Jump to: navigation, search
(<font face="chalkboard"><font color= 'tan'>Assembly Issues</font color></font face><font outline color>)
(<font face="chalkboard"><font color= 'tan'>Assembly Issues</font color></font face><font outline color>)
Line 60: Line 60:
* <font face="chalkboard">[[The What's and How's]]</font face>
* <font face="chalkboard">[[The What's and How's]]</font face>
* <font face="chalkboard"> [[Assembly powerpoint]]</font face>
* <font face="chalkboard"> [[Assembly powerpoint]]</font face>
 +
*[[Assembly plan]]
== <font color='cyan'><font face="chalkboard">Current Course of Action</font face></font color>==  
== <font color='cyan'><font face="chalkboard">Current Course of Action</font face></font color>==  

Revision as of 20:45, 20 June 2006

Logo.gif

DC team.JPG E hop.jpg

Malcolm, Laurie, Sabriya, Erin, Lance
Logo Mascotlogo

Contents

Students

Sabriya Rosemond is a great person.

Erin Zwack ate cricket cookies once.

Lance Harden likes vacations.

Faculty

A. Malcolm Campbell [http://www.bio.davidson.edu/campbell Department of Biology]

Laurie J. Heyer [http://www.davidson.edu/math/heyer/ Department of Mathematics]

Papers of Interest

• [http://www.bio.davidson.edu/courses/synthetic/papers/Sanders_04.pdf Stepwise Dissection of the Hin-catalyzed Recombination Reaction from Synapsis to Resolution. Erin R. Sanders and Reid C. Johnson]

• [http://www.molcells.org/home/journal/article_read.asp?volume=16&number=3&startpage=377 The Effects of Ethidium Bromide and Mg++ Ion on Strand Exchange in the Hin-mediated Inversion Reaction. Hee Jung Lee et al.] Excellent description of Hin recombination mechanism.

• '[http://www.jbc.org/cgi/reprint/267/16/11183 The Effects of Symmetrical Recombination Site hixC on Hin Recombinase Function. Heon Man Lim et al.]

• [http://www.pubmedcentral.gov/articlerender.fcgi?tool=pubmed&pubmedid=3457367 The role of the loxP spacer region in P1 site-specific recombination. Ronald H.Hoess et al.]

• [http://www.biomedcentral.com/1471-2164/7/73 A high-throughput screen identifying sequence and promiscuity characteristics of the loxP spacer region in Cre-mediated recombination. Perseus I Missirlis et al.]

• [http://nar.oxfordjournals.org/cgi/content/full/30/13/2764 Non-contact positions impose site selectivity on Cre recombinase. Andreas W. Rufer and Brian Sauer]

• '[http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=103771 Growth Phase-Dependent Variation in Protein Composition of the Escherichia coli Nucleoid]

• [http://www.jbc.org/cgi/content/full/272/29/18434 Hin-mediated Inversion on Positively Supercoiled DNA]

• [http://jb.asm.org/cgi/content/full/185/3/1097 Plasmid DNA Supercoiling and Gyrase Activity in Escherichia coli Wild-Type and rpoS Stationary-Phase Cells]

Parts Created

Davidson Parts

Questions

Assembly Issues

Current Course of Action

Plasmids and Bacteria     Hix and RE

Pancake Simulators aka The Lancelator

MATLAB Code

[http://gcat.davidson.edu/IGEM06/randompancakeflipper.m User-Friendly Version]
[http://gcat.davidson.edu/IGEM06/powerflipper.m Power-User Version]
[http://gcat.davidson.edu/IGEM06/powerflipperplus.m Power-User Update]
[http://gcat.davidson.edu/IGEM06/findmin.m Findmin]
[http://gcat.davidson.edu/IGEM06/bigtrial.m Bigtrial]
[http://gcat.davidson.edu/IGEM06/pancakeplotter.m Pancakeplotter]
[http://gcat.davidson.edu/IGEM06/signedperms.m Signedperms]

Personal tools
Past/present/future years