Davidson 2006

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(<font face="Gill Sans Ultra Bold"><font color= 'tan'>'''Assembly Issues'''</font color></font face><font outline color>)
(<font color='cyan'><font face="Gill Sans Ultra Bold">'''Current Course of Action'''</font face>)
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== <font color='cyan'><font face="Gill Sans Ultra Bold">'''Current Course of Action'''</font face>==  
== <font color='cyan'><font face="Gill Sans Ultra Bold">'''Current Course of Action'''</font face>==  
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<font face="Gill Sans Ultra Bold">[[Plasmids and Bacteria]] </font face>
<font face="Gill Sans Ultra Bold">[[Plasmids and Bacteria]] </font face>
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=='''Pancake Simulators aka <font color='red'>T</font color><font color='blue'>h</font color><font color='orange'>e</font color><font color='silver'> L</font color><font color='sky blue'>a</font color><font color='magenta'>n</font color><font color= 'orange'>c</font color><font color='green'>e</font color><font color=cyan>l</font color><font color='red'>a</font color><font color='brown'>t</font color><font color='blue'>o</font color><font color='violet'>r</font color>'''==
=='''Pancake Simulators aka <font color='red'>T</font color><font color='blue'>h</font color><font color='orange'>e</font color><font color='silver'> L</font color><font color='sky blue'>a</font color><font color='magenta'>n</font color><font color= 'orange'>c</font color><font color='green'>e</font color><font color=cyan>l</font color><font color='red'>a</font color><font color='brown'>t</font color><font color='blue'>o</font color><font color='violet'>r</font color>'''==
[http://gcat.davidson.edu/IGEM06/randompancakeflipper.m MATLAB Code for User-Friendly Version]<br>
[http://gcat.davidson.edu/IGEM06/randompancakeflipper.m MATLAB Code for User-Friendly Version]<br>
[http://gcat.davidson.edu/IGEM06/powerflipper.m MATLAB Code for Power-User Version]
[http://gcat.davidson.edu/IGEM06/powerflipper.m MATLAB Code for Power-User Version]

Revision as of 13:05, 8 June 2006

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DC team.JPG E hop.jpg

Malcolm, Laurie, Sabriya, Erin, Lance


Contents

Students

Sabriya Rosemond is a rising junior biology major at Hampton University in VA.

Erin Zwack is a rising junior biology major at Davidson College in NC.

Lance Harden is a rising sophomore at Davidson College, who might major in math.

Faculty

A. Malcolm Campbell [http://www.bio.davidson.edu/campbell Department of Biology]

Laurie J. Heyer [http://www.davidson.edu/math/heyer/ Department of Mathematics]

Papers of Interest

[http://www.bio.davidson.edu/courses/synthetic/papers/Sanders_04.pdf Stepwise Dissection of the Hin-catalyzed Recombination Reaction from Synapsis to Resolution. Erin R. Sanders and Reid C. Johnson]

[http://www.molcells.org/home/journal/article_read.asp?volume=16&number=3&startpage=377 The Effects of Ethidium Bromide and Mg++ Ion on Strand Exchange in the Hin-mediated Inversion Reaction. Hee Jung Lee et al.] Excellent description of Hin recombination mechanism.

[http://www.jbc.org/cgi/reprint/267/16/11183 The Effects of Symmetrical Recombination Site hixC on Hin Recombinase Function. Heon Man Lim et al.]

[http://www.pubmedcentral.gov/articlerender.fcgi?tool=pubmed&pubmedid=3457367 The role of the loxP spacer region in P1 site-specific recombination. Ronald H.Hoess et al.]

[http://www.biomedcentral.com/1471-2164/7/73 A high-throughput screen identifying sequence and promiscuity characteristics of the loxP spacer region in Cre-mediated recombination. Perseus I Missirlis et al.]

[http://nar.oxfordjournals.org/cgi/content/full/30/13/2764 Non-contact positions impose site selectivity on Cre recombinase. Andreas W. Rufer and Brian Sauer]

[http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=103771 Growth Phase-Dependent Variation in Protein Composition of the Escherichia coli Nucleoid]

[http://www.jbc.org/cgi/content/full/272/29/18434 Hin-mediated Inversion on Positively Supercoiled DNA]

[http://jb.asm.org/cgi/content/full/185/3/1097 Plasmid DNA Supercoiling and Gyrase Activity in Escherichia coli Wild-Type and rpoS Stationary-Phase Cells]

Parts Created

Davidson Parts

Questions

Assembly Issues

The What's and How's </div>

Current Course of Action

Plasmids and Bacteria

Pancake Simulators aka The Lancelator

[http://gcat.davidson.edu/IGEM06/randompancakeflipper.m MATLAB Code for User-Friendly Version]
[http://gcat.davidson.edu/IGEM06/powerflipper.m MATLAB Code for Power-User Version]

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