Phase 1: PCR Amplification of Genes

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'''A.  Isolating genes for the quorum sensing mechanism from genomic ''B. subtilis'' DNA'''  
'''A.  Isolating genes for the quorum sensing mechanism from genomic ''B. subtilis'' DNA'''  
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       1. ComX - pheromone, 168bp
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       "1. ComX - pheromone, 168bp
             Primers:  Fwd = CGGAATTCGCTCTAGATGCAAGACCTAATTAACTACTTTTTAAATTATCC
             Primers:  Fwd = CGGAATTCGCTCTAGATGCAAGACCTAATTAACTACTTTTTAAATTATCC
                       Rev = GACTGCAGCTACTAGTTAATCACCCCATTGACGGGTTATTGG
                       Rev = GACTGCAGCTACTAGTTAATCACCCCATTGACGGGTTATTGG
             Notes:   
             Notes:   
             Forward primer contains EcoRI and XbaI cut sites; Reverse primer contains SpeI and PstI cut sites
             Forward primer contains EcoRI and XbaI cut sites; Reverse primer contains SpeI and PstI cut sites
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             Amplification of ComX alone was unsuccessful.  However, ComQ and ComX are adjacent on the genome so we subsequently amplified them together
+
             Amplification of ComX alone was unsuccessful.  However, ComQ and ComX are adjacent on the genome so we subsequently amplified them together"

Revision as of 20:46, 23 October 2006

A. Isolating genes for the quorum sensing mechanism from genomic B. subtilis DNA

      "1. ComX - pheromone, 168bp
           Primers:  Fwd = CGGAATTCGCTCTAGATGCAAGACCTAATTAACTACTTTTTAAATTATCC
                     Rev = GACTGCAGCTACTAGTTAATCACCCCATTGACGGGTTATTGG
           Notes:  
           Forward primer contains EcoRI and XbaI cut sites; Reverse primer contains SpeI and PstI cut sites
           Amplification of ComX alone was unsuccessful.  However, ComQ and ComX are adjacent on the genome so we subsequently amplified them together"
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