Swiss Watch
From 2006.igem.org
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'This page/idea is no longer updated. For the last details about oscillator based ideas, have a look at Oscillator_based'
Contents |
Intro
When you think about Switzerland (visitor: ETH is a university in that particular country) the first things you associate with this country may be chees, chocolate and of course watches. So a bacterial Swiss watch would be cool to develop.
Principle
The idea is to develop a relative fast and mainly robust and precise (otherwise it wouldn't be a swiss watch ;-)) triggering of at least 2 different output signals in order to distinguish between minutes and hours (as the processes are not so fast it will be more likely hours and days).
Approaches
The 'Cell Duplication' approach
As bacterias duplicate themselves rather fast and in periodic intervals - as long as the environmental conditions allow it - one could use the duplication for triggering an output. For example the DnaA protein or the concentration of the produced mioC and oriC respectivly could be such triggering substances (see paper suetsugu03). This approach could also be used as a kind of a 'Generation Counter'.
The 'Single Oscillator' approach
With a stable and robust oscillator (see paper atkinson03) one could rather easily implement a watch by just counting the peaks (see also 'Oscillation Counter').
The 'Beat' approach
With the combination of two oscillators of different frequencies one could establish a kind of a beat. One oscillator could be used as the 'minute hand' and the when the beat reaches its maximum the 'short hand' gives an impulse.
Alternative approach
The focus of the project could be reduced to creating an oscillator that is simple, robust, and very regular. To make things even more attractive, one could build a quorum sensing component that synchronizes the whole population. (Strange, i think i already saw something like that somewhere in the registry of biological parts, does anybody have an idea?)
Discussion
>> for comments, questions and temporary remarks go to the Talk:Swiss_Watch
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