Table of preliminary model constants

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=Table of preliminary model constants=
====General Parameters====
====General Parameters====
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{| border=1 cellspacing=0 cellpadding=5
{| border=1 cellspacing=0 cellpadding=5
Line 11: Line 15:
|Plasmid Copy Number
|Plasmid Copy Number
|-
|-
 +
|v
 +
|1um^3
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|cell volume
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|-
 +
|}
|}
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|c4L
|c4L
|.33
|.33
-
|Equilibrium constant for LacI binding
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|Equilibrium constant for LacI tetramer binding to Lac operator
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|-
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|c1T
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|.05
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|Equilibrium constant for TetR dimerization
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|-
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|c2T
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|.33
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|Equilibrium constant for TetR dimer binding to first operator
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|-
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|c3T
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|.33
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|Equilibrium constant for TetR dimer binding to second operator
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|-
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|c1A
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|.05
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|Equilibrium constant for AraC monomer binding to first operator
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|-
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|c2A
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|.33
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|Equilibrium constant for AraC monomer binding to second operator
|-
|-
|}
|}

Latest revision as of 06:56, 1 November 2006

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Table of preliminary model constants

General Parameters

Parameter Value Meaning
m 20 Copies Plasmid Copy Number
v 1um^3 cell volume

Inhibitor Protein Parameters

Parameter Value Meaning
alphaT1 .01 Relative transcription level for repressed (1 TetR dimer bound) pTetR promoter
alphaT2 .01 Relative transcription level for doubly repressed (2 TetR dimers bound) pTetR promoter
alphaL .01 Relative transcription level for repressed (1 LacI tetramer bound) pLacI promoter
alphaA .01 Relative transcription level for repressed (two AraC monomers bound) pBAD promoter
betaA 1000 maximum number of proteins produced from the pBAD promoter per cell division
betaL 1000 maximum number of proteins produced from the pLacI promoter per cell division
betaT 1000 maximum number of proteins produced from the pTetR promoter per cell division
etaLT 1 Relative rate of TetR translation from pLacI promoter
etaLA 1 Relative rate of AraC translation from pLacI promoter
etaAL 1 Relative rate of LacI translation from pBAD promoter
etaAT 1 Relative rate of TetR translation from pBAD promoter
etaTL 1 Relative rate of LacI translation from pTetR promoter
etaTA 1 Relative rate of AraC translation from pTetR promoter
c1L .05 Equilibrium constant for LacI dimerization
c2L .05 Equilibrium constant for LacI trimerization
c3L .05 Equilibrium constant for LacI tetramerization
c4L .33 Equilibrium constant for LacI tetramer binding to Lac operator
c1T .05 Equilibrium constant for TetR dimerization
c2T .33 Equilibrium constant for TetR dimer binding to first operator
c3T .33 Equilibrium constant for TetR dimer binding to second operator
c1A .05 Equilibrium constant for AraC monomer binding to first operator
c2A .33 Equilibrium constant for AraC monomer binding to second operator
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