BU06:resources

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Revision as of 16:33, 12 June 2006

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Why didn't the Registry include empty resistance plasmids in the DNA shipment?

Check the [http://partsregistry.org/Registry_FAQ Registry FAQ].

[http

//partsregistry.org/cgi/htdocs/Assembly/index.cgi Standard Assembly] : the basics of building and manipulating Parts, including details about XbaI and SpeI, the restriction enzymes that are the basis of these operations.

RBS-CDS design issues 

how the ribosomal binding site is [http://partsregistry.org/cgi/htdocs/Assembly/rbs_cds.cgi reconciled] with the location of the BioBrick ends.

Key to our design

[http://partsregistry.org/Lux Lux operon] in the Registry Glossary

An overview of UT Austin's [http://partsregistry.org/Featured_Parts:Light_Sensor Light Sensor] system.

Vectors

[http://www.ncbi.nlm.nih.gov/VecScreen/replist.html VecScreen] has a list of all the vector nucleotide sequences in ncbi.

[http://seq.yeastgenome.org/vectordb/ VectorDB] contains annotations and sequence information for many vectors (2600+) commonly used in molecular biology.

[http://wishart.biology.ualberta.ca/PlasMapper/ PlasMapper] generates sweet annotated vector-based plasmid maps from a web interface.

• Tons of protocols at [http://openwetware.org/wiki/Protocols OpenWetWare]
• Misc. links at the main iGEM Resources page (used to be "teaching resources" page
• [http://partsregistry.org/cgi/htdocs/Assembly/index.cgi standard assembly]
• Abstraction hierarchy and PoPS
• [http://openwetware.org/wiki/Standard_E._coli_Strain_for_BioBricks Standard E. coli Strain for BioBricks]
• Synthetic Biology articles in DSpace:
  • Definitions and Measures of Performance for Standard Biological Parts
  • Engineering the Interface Between Cellular Chassis and Integrated Biological Systems
  • GeneJax: A Prototype CAD tool in support of Genome Refactoring
• [http://openwetware.org/wiki/BE.109:Systems_engineering/RT-PCR_data_analysis BE.109: RT-PCR data analysis]