Documentation ToDo's

From 2006.igem.org

Here you can find a List of things that need to be done in the Project Documentation section. In brackets there is a suggestion of who could perform the change or addition, or find someone else to do it.

Big Tasks

• (???) Write an introduction for the documentation, don't forget to say that there are some previous ideas in the Appendix.
• (Jonas) There is no section about the modularity of our counter system (how to connect multiple systems to count to 2^n). I think this is a very important aspect and should be well documented. This, I think, will be part of the concept.
• (Robin) Include the concept part...

Small Tasks

Input Module

• (Dominic) In the purpose of the input module, you write about the Signal 'S'. But this signal is neighter in the picture, nor explained anywhere in the text.
• (Dominic) In the schematic of the input module: The names in the legend do not correspond to the names in the picture.
• (Dominic) In the 'suitable strategies' section of the input module, you name two remaining possible solutions. The lambda system is explained afterwards and this should be mentioned here. For the Lux system there should be a short description.
• (Dominic) In the 'selected system' section of the input module, you say '... (which is crucial as modeling has shown).' I think this should have some reference to the modeling section.
• (Dominic, Biologists..) You often use the words 'clone' and 'synthesize' in the context of connecting DNA Parts. Are these the correct technical terms? Maybe we could put something in the glossary.
• (Dominic) In the legend of the 'cloning steps and debugging'-Picture you write in point four, that there will be three cloning sessions (with two to for individual steps). Later in the cloning schedule you talk about four cloning sessions.

NOR Module

• (Robin?) Fit the content of the Chapter to the following structure: Purpose, Schematic, Strategies & Evaluation, Actual Implementation
• (???) In the purpose section we should describe in detail how the NOR module fits into the counter system.
• (???) Revise the introduction of the NOR Module on the Main Page
• (???) Describe the words 'Zinc Hand' 'Zinc Finger' in the glossary
• (Alex) Design -> Repressors: What do you want to write about RNA Polymerase?
• (Alex) Design -> Repressors -> Zinc Finger Proteins: You write that we use several different designs. Is this still up to date?
• (Alex, ???) Design -> Repressors -> Zinc finger Protein Binding Sites: I think it would be nice to have some pictures there.
• (Alex) Design -> Interconnected NOR System -> Repression: This section is not up to date (As far as I understand, we decided not to use any repressor connectet to the ZF)
• (Alex) Design -> Interconnected NOR System -> Additional Comments: Maybe not up to date.
• (Alex) Syntesis and Assembly: Section has to be completed.